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SampleCore: Sampling Strategies for Constructing Core Collections

Version : 0.0.0.9000; License: GPL-2|GPL-3
Aravind, J. and Suman Roy

Division of Germplasm Conservation, ICAR-National Bureau of Plant Genetic Resources, New Delhi.

minimal R version License: GPL v3 Github Code Size Project Status: WIP lifecycle Last-changedate Website - pkgdown

Description

Implements several sampling strategies for construction of corecollections. These include 1) Stratified sampling based on group size 2)Stratified sampling based on group diversity 3) Sampling based on geneticdistance between accessions. See the vignette for more, including full listof citations for the methods implemented.

Installation

The development version can be installed from github as follows:

# Install development version from Github
devtools::install_github("aravind-j/SampleCore")

What’s new

To know whats new in this version type:

news(package='SampleCore')

Github page

Documentation website

Citing SampleCore

To cite the methods in the package use:

citation("SampleCore")
To cite package 'SampleCore' in publications use:

  Aravind J, Roy S (2025). _SampleCore: Sampling Strategies for
  Constructing Core Collections_. R package version 0.0.0.9000,
  <https://github.com/aravind-j/SampleCorehttps://aravind-j.github.io/SampleCore/>.

A BibTeX entry for LaTeX users is

  @Manual{,
    title = {SampleCore: Sampling Strategies for Constructing Core Collections},
    author = {J. Aravind and Suman Roy},
    year = {2025},
    note = {R package version 0.0.0.9000},
    url = {https://github.com/aravind-j/SampleCore
https://aravind-j.github.io/SampleCore/},
  }