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To be used by diversity.calc.

Usage

berger_parker(x)

berger_parker_reciprocal(x)

simpson(x)

gini_simpson(x)

simpson_max(x)

simpson_reciprocal(x)

simpson_relative(x)

simpson_evenness(x)

shannon(x, base = 2)

shannon_max(x, base = 2)

shannon_relative(x, base = 2)

shannon_ens(x, base = 2)

mcintosh_diversity(x)

mcintosh_evenness(x)

smith_wilson(x, warn = TRUE)

heip_evenness(x)

margalef_index(x)

menhinick_index(x)

brillouin_index(x)

hill_number(x, q = 1)

renyi_entropy(x, q = 1)

tsallis_entropy(x, q = 1)

hill_evenness(x, q = 1)

Arguments

x

A factor vector of categories (e.g., species, traits). The frequency of each level is treated as the abundance of that category.

base

The logarithm base to be used for computation of shannon family of diversity indices. Default is exp(1).

warn

logical. If TRUE shows the relevant warning. Default is TRUE.

q

The order of the parametric index.

Value

The calculated diversity index value.